Beta-Catenin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Beta-Catenin
  Conformer 1
(PDB)
1g3j (A)
  Conformer 2
(PDB)
2bct  
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 254 0.77   389 - 393   400 - 662
2 241 0.69   154 - 388   394 - 399

Sequence


           ________________________________________________________________________________________________________________________ 
 1g3j(A) : HAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLF 
         :                                                                                                                          
 2bct    : ****************TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLF 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1g3j(A) : YAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP 
         :                                                                                                                          
 2bct    : YAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP 
           ________________________________________________________________________________________________________________________ 

           ____________388________399______________________________________________________________________________________________ 
 1g3j(A) : SQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 
         :                                                                                                                          
 2bct    : SQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPV 
           ____________388________399______________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1g3j(A) : VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRfVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA 
         :                                                                                                                          
 2bct    : VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQR-----vRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________                                                                              
 1g3j(A) : QDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSE*                                                                              
         :                                                                                                                          
 2bct    : QDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSED                                                                              
           ___________________________________________                                                                              

Morph

Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.2
Translation
(A)
-0.7
Closure
(%)
44.5
Bending Residues
( green )
  388 - 395
  399 - 400
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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