Bifunctional Sat/aps Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bifunctional Sat/aps Kinase
  Conformer 1
(PDB)
2gks (B)
  Conformer 2
(PDB)
2gks (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 331 0.52   6 - 304   307 - 317   339 - 339   342 - 344   349 - 365
2 187 2.32   305 - 306   318 - 338   340 - 341   345 - 348   366 - 544

Sequence


           ________________________________________________________________________________________________________________________ 
 2gks(B) : KIKYLKSIQISQRSVLDLELLAVGAFTPLDRFMGEEDYRNVVESMRLKSGTLFPIPITLPMEKEIAKDLKEGEWIVLRDPKNVPLAIMRVEEVYKWNLEYEAKNVLGTTDPRHPLVAEMH 
         :                                                                                                                          
 2gks(A) : *IKYLKSIQISQRSVLDLELLAVGAFTPLDRFMGEEDYRNVVESMRLKSGTLFPIPITLPMEKEIAKDLKEGEWIVLRDPKNVPLAIMRVEEVYKWNLEYEAKNVLGTTDPRHPLVAEMH 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2gks(B) : TWGEYYISGELKVIQLPKYYDFPEYRKTPKQVREEIKSLGLDKIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVGLTKPGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLAMRMA 
         :                                                                                                                          
 2gks(A) : TWGEYYISGELKVIQLPKYYDFPEYRKTPKQVREEIKSLGLDKIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVGLTKPGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLAMRMA 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________________304__________317___338_______348______________365____________ 
 2gks(B) : GPREALWHGIIRRNYGATHFIVGRDHASPGKDSKGKPFYDPYEAQELFKKYEDEIGIKMVPFEELVYVPELDQYVEINEiRENFLKQGRKLPEWFTRPEVAEILAETYVPKHKQGFCVWL 
         :                                                                                                                          
 2gks(A) : GPREALWHGIIRRNYGATHFIVGRDHASPGKDSKGKPFYDPYEAQELFKKYEDEIGIKMVPFEELVYVPELDQYVEINEiRENFLKQGRKLPEWFTRPEVAEILAETYVPKHKQGFCVWL 
           ___________________________________________________________304__________317___338_______348______________365____________ 

           ________________________________________________________________________________________________________________________ 
 2gks(B) : TGLPCAGKSTIAEILATMLQARGRKVTLLDGDVVRTHLSRGLGFSKEDRITNILRVGFVASEIVKHNGVVICALVSPYRSARNQVRNMMEEGKFIEVFVDAPVEVCEERDVKGLYKKAKE 
         :                                                                                                                          
 2gks(A) : TGLPCAGKSTIAEILATMLQARGRKVTLLDGDVVRTHLSRGLGFSKEDRITNILRVGFVASEIVKHNGVVICALVSPYRSARNQVRNMMEEGKFIEVFVDAPVEVCEERDVKGLYKKA-- 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________                                                                        
 2gks(B) : GLIKGFTGVDDPYEPPVAPEVRVDTTKLTPEESALKILEFLKKEGFIKD                                                                        
         :                                                                                                                          
 2gks(A) : ----gFTGVDDPYEPPVAPEVRVDTTKLTPEESALKILEFLKKEGFIKD                                                                        
           _________________________________________________                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.8
Translation
(A)
0.3
Closure
(%)
81.8
Bending Residues
( green )
  304 - 307
  317 - 318
  338 - 345
  348 - 352
  365 - 366
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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