Catabolite Control Protein A

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Catabolite Control Protein A
  Conformer 1
(PDB)
2o20 (C)
  Conformer 2
(PDB)
2o20 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 133 0.42   65 - 163   191 - 191   193 - 193   291 - 322
2 133 0.45   164 - 190   192 - 192   194 - 290   323 - 330

Sequence


           _______________________________________________________________________________________________________163______________ 
 2o20(C) : *****TTTVGVILPTITSTYFAAITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSLKNSRTPVVLVGTIDGDKEIPSVNIDYHLAAYQSTKKLID 
         :                                                                                                                          
 2o20(B) : LASKRTTTVGVILPTITSTYFAAITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSLKNSRTPVVLVGTIDGDKEIPSVNIDYHLAAYQSTKKLID 
           _______________________________________________________________________________________________________163______________ 

           __________190_________________________________________________________________________________________________290_______ 
 2o20(C) : SGNKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEGNYSYEQGKALAERLLERGATSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGANSPITQYTYPTLTSVNQPLYDL 
         :                                                                                                                          
 2o20(B) : SGNKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEGNYSYEQGKALAERLLERGATSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGANSPITQYTYPTLTSVNQPLYDL 
           __________190_________________________________________________________________________________________________290_______ 

           ______________________322__________                                                                                      
 2o20(C) : GAVAMRLLTKLMLKEDVEQNQLVLDHEIFSRRSTK                                                                                      
         :                                                                                                                          
 2o20(B) : GAVAMRLLTKLMLKEDVEQNQLVLDHEIFSRRSTK                                                                                      
           ______________________322__________                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.6
Translation
(A)
0.2
Closure
(%)
91.1
Bending Residues
( green )
  163 - 164
  190 - 194
  290 - 291
  322 - 323
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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