Chemotaxis Protein Chea

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chemotaxis Protein Chea
  Conformer 1
(PDB)
1i5d (A)
  Conformer 2
(PDB)
1i5a (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 129 0.73   355 - 452   507 - 537
2 43 1.39   453 - 506

Sequence


           ____________________________________________________________________________________________________452_________________ 
 1i5d(A) : VMKIRMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLI 
         :                                                                                                                          
 1i5a(B) : ***SHMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLI 
           ____________________________________________________________________________________________________452_________________ 

           __________________________________506__________________________________                                                  
 1i5d(A) : DESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKVTIRLPL*                                                  
         :                                                                                                                          
 1i5a(B) : DESKAATLSDQEILNFLFVPGFST-----------vGMDVVKNVVESLNGSISIESEKDKGTKVTIRLPLT                                                  
           __________________________________506__________________________________                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
21.8
Translation
(A)
-0.2
Closure
(%)
60.8
Bending Residues
( green )
  452 - 454
  506 - 508
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download