Chemotaxis Protein Chea

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chemotaxis Protein Chea
  Conformer 1
(PDB)
1i5d (A)
  Conformer 2
(PDB)
1i58 (A)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 133 0.93   356 - 454   486 - 488   505 - 535
2 45 2.29   455 - 485   489 - 502

Sequence


           _____________________________________________________________________________________________________453________________ 
 1i5d(A) : VMKIRMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLI 
         :                                                                                                                          
 1i58(A) : **GSHMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLI 
           _____________________________________________________________________________________________________453________________ 

           _____________485_____493_______________________________________________                                                  
 1i5d(A) : DESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKVTIRLPL*                                                  
         :                                                                                                                          
 1i58(A) : DESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKVTIRLPLT                                                  
           _____________485_____493_______________________________________________                                                  

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
16.4
Translation
(A)
-0.4
Closure
(%)
45.2
Bending Residues
( green )
  453 - 455
  485 - 486
  488 - 489
  493 - 510
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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