Chlorophenol Reduction Gene K

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chlorophenol Reduction Gene K
  Conformer 1
(PDB)
2h6b (A)
  Conformer 2
(PDB)
2h6b (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 132 0.75   15 - 146
2 84 2.64   147 - 239

Sequence


           ________________________________________________________________________________________________________________________ 
 2h6b(A) : VEGLGKDFCGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDM 
         :                                                                                                                          
 2h6b(B) : ******DFCGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSEKSLRTVFRTDEDM 
           ________________________________________________________________________________________________________________________ 

           _________________142____________________________________________________________________________________________________ 
 2h6b(A) : IFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLSEQTsVDKLAAALDHH* 
         :                                                                                                                          
 2h6b(B) : IFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLACLKRENILDKKKNKIIVYNLGELKHLSEQTSYYSDPNSSSVDK 
           _________________142____________________________________________________________________________________________________ 

           _                                                                                                                        
 2h6b(A) : *                                                                                                                        
         :                                                                                                                          
 2h6b(B) : L                                                                                                                        
           _                                                                                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
56.4
Translation
(A)
-1.2
Closure
(%)
61.2
Bending Residues
( green )
  142 - 151
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

Download and extract PyMOL PML script file Download