Chlorocatechol 1,2-Dioxygenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chlorocatechol 1,2-Dioxygenase
  Conformer 1
(PDB)
1s9a (A)
  Conformer 2
(PDB)
1s9a (B)
  Window Length 13
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 150 0.52   59 - 170   191 - 219   222 - 230
2 72 0.38   9 - 58   171 - 190   220 - 221
3 21 1.28   231 - 251

Sequence


           ______________________________________________________57________________________________________________________________ 
 1s9a(A) : ANTRVIELFDEFTDLIRDFIVRHEITTPEYETIMQYMISVGEAGEWPLWLDAFFETTVDSVSYGKGNWTSSAIQGPFFKEGAPLLTGKPATLPMRADEPGDRMRFTGSVRDTSGTPITGA 
         :                                                                                                                          
 1s9a(B) : ANTRVIELFDEFTDLIRDFIVRHEITTPEYETIMQYMISVGEAGEWPLWLDAFFETTVDSVSYGKGNWTSSAIQGPFFKEGAPLLTGKPATLPMRADEPGDRMRFTGSVRDTSGTPITGA 
           ______________________________________________________57________________________________________________________________ 

           ______________________________________________170_______________188____________________________219________230___________ 
 1s9a(A) : VIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEIPKAGPTGQLMNSYLGRHSWRPAHIHIRITADGYRPLITQLYFEGDPYLDSDSCSAVKSELVLPVNKIDID 
         :                                                                                                                          
 1s9a(B) : VIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEIPKAGPTGQLMNSYLGRHSWRPAHIHIRITADGYRPLITQLYFEGDPYLDSDSCSAVKSELVLPVNKIDID 
           ______________________________________________170_______________188____________________________219________230___________ 

           ________________                                                                                                         
 1s9a(A) : GETWQLVDFNFILQHN                                                                                                         
         :                                                                                                                          
 1s9a(B) : GETWQLVDFNFILQHN                                                                                                         
           ________________                                                                                                         

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.5
Translation
(A)
0.1
Closure
(%)
94.7
Bending Residues
( green )
  57 - 63
  170 - 171
  188 - 191
  219 - 222
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
10.5
Translation
(A)
0.0
Closure
(%)
76.8
Bending Residues
( green )
  230 - 231
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Shear

PyMOL Script

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