Chorismate Lyase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chorismate Lyase
  Conformer 1
(PDB)
2ahc (C)
  Conformer 2
(PDB)
2ahc (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 138 0.68   4 - 12   28 - 28   34 - 161
2 20 2.12   13 - 27   29 - 33

Sequence


           _________11______________27____33_______________________________________________________________________________________ 
 2ahc(C) : SHPALTQLRALRYSKEIPALDPQLLDWLLLEDSMTKRFEQQGKTVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLSADGEPWLAGRTVVPVSTLSGPELALQKLGKTPLGRYLFT 
         :                                                                                                                          
 2ahc(B) : SHPALTQLRALRYSKEIPALDPQLLDWLLLEDSMTKRFEQQGKTVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLSADGEPWLAGRTVVPVSTLSGPELALQKLGKTPLGRYLFT 
           _________11______________27____33_______________________________________________________________________________________ 

           ____________________________________________                                                                             
 2ahc(C) : SSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLPASPLY                                                                             
         :                                                                                                                          
 2ahc(B) : SSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLPASPLY                                                                             
           ____________________________________________                                                                             

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
18.9
Translation
(A)
-1.0
Closure
(%)
89.0
Bending Residues
( green )
  11 - 13
  27 - 29
  33 - 36
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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