Chromosome Partition Protein Mukf

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chromosome Partition Protein Mukf
  Conformer 1
(PDB)
1t98 (A)
  Conformer 2
(PDB)
1t98 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 77 0.56   124 - 164   225 - 264
2 96 0.59   11 - 116
3 36 0.6   174 - 213   275 - 277

Sequence


           ___________________________________________________________________________________________________116__________________ 
 1t98(A) : ***VPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEsEGELVDAFRHVSDAFEQTSETIGVRANNAINDvRQRLLNRFTiYRLTPLGIGITDYYIRQREFSTLRLSqLSIVAGE 
         :                                                                                                                          
 1t98(B) : SQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEsEGELVDAFRHVSDAFEQTSETIGVRANNAINDvRQRLLNRFTiYRLTPLGIGITDYYIRQREFSTLRLSqLSIVAGE 
           ___________________________________________________________________________________________________116__________________ 

           __________________________164_____________________________________________213___________________________________________ 
 1t98(A) : LKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLdEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDATtHDDLHFVDRLVFDLQ 
         :                                                                                                                          
 1t98(B) : LKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLdEQQQQVKDDIAQLLN------iSSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDA--hDDLHFVDRLVFDLQ 
           __________________________164_____________________________________________213___________________________________________ 

           ____264_________________                                                                                                 
 1t98(A) : SKLDRIISWGQQSIDLWIGYDRHV                                                                                                 
         :                                                                                                                          
 1t98(B) : SKLDRIISWGQQSIDLWIGYDRHV                                                                                                 
           ____264_________________                                                                                                 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
10.1
Translation
(A)
-1.7
Closure
(%)
91.5
Bending Residues
( green )
  116 - 125
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
16.3
Translation
(A)
0.6
Closure
(%)
22.7
Bending Residues
( green )
  164 - 175
  213 - 226
  264 - 275
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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