Crotonobetainyl-Coa:carnitine Coa-Transferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Crotonobetainyl-Coa:carnitine Coa-Transferase
  Conformer 1
(PDB)
1xk7 (A)
  Conformer 2
(PDB)
1xa4 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 287 0.25   7 - 227   322 - 401
2 93 0.28   228 - 321

Sequence


           ________________________________________________________________________________________________________________________ 
 1xk7(A) : SHdHLPpKFGPLAGLRVVFSGIEIAGPFAGQfAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLeTTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAH 
         :                                                                                                                          
 1xa4(A) : ****LPpKFGPLAGLRVVFSGIEIAGPFAGQfAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLeTTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAH 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________216________________________________ 
 1xk7(A) : LSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPpAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAyEVlRgQYFdYFNGGEcPRsKGKDPYYAGCGLYKCADGYIVeLV 
         :                                                                                                                          
 1xa4(A) : LSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPpAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAyEVlRgQYFdYFNGGEcPRsKGKDPYYAGCGLYKCADGYIVeLV 
           _____________________________________________________________________________________216________________________________ 

           ________________________________________________________________318_____________________________________________________ 
 1xk7(A) : GITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTdGRTCKGPNIpKFKNNPGQIWRGpSH 
         :                                                                                                                          
 1xa4(A) : GITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTdGRTCKGPNIpKFKNNPGQIWRGpSH 
           ________________________________________________________________318_____________________________________________________ 

           ______________________________                                                                                           
 1xk7(A) : GdTAAILKNIGYSENDIQELVSKGLAKVED                                                                                           
         :                                                                                                                          
 1xa4(A) : GdTAAILKNIGYSENDIQELVSKGLAKV**                                                                                           
           ______________________________                                                                                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
13.8
Translation
(A)
0.1
Closure
(%)
99.5
Bending Residues
( green )
  216 - 231
  318 - 323
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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