Cytochrome P450cam

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cytochrome P450cam
  Conformer 1
(PDB)
1k2o (A)
  Conformer 2
(PDB)
2frz (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 286 0.84   12 - 93   100 - 111   119 - 123   132 - 157   252 - 412
2 115 1.43   94 - 99   112 - 118   124 - 131   158 - 251

Sequence


           _____________________________________________________________________________87__________99_________111____118__________ 
 1k2o(A) : ANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLE 
         :                                                                                                                          
 2frz(B) : *NLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPWIPREAGEAFDFIPTSMDPPEQRQFRALANQVVGMPVVDKLE 
           _____________________________________________________________________________87__________99_________111____118__________ 

           131_______________________157___________________________________________________________________________________________ 
 1k2o(A) : NRIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVG 
         :                                                                                                                          
 2frz(B) : NRIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLLG 
           131_______________________157___________________________________________________________________________________________ 

           251_____________________________________________________________________________________________________________________ 
 1k2o(A) : GLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREII 
         :                                                                                                                          
 2frz(B) : GLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREII 
           251_____________________________________________________________________________________________________________________ 

           ______________________________________________                                                                           
 1k2o(A) : VTLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPATTKAV                                                                           
         :                                                                                                                          
 2frz(B) : VTLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPATTKAV                                                                           
           ______________________________________________                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
16.3
Translation
(A)
0.0
Closure
(%)
61.8
Bending Residues
( green )
  87 - 96
  99 - 102
  111 - 112
  118 - 124
  131 - 135
  157 - 158
  251 - 252
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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