Elongation Factor Ts

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Elongation Factor Ts
  Conformer 1
(PDB)
1tfe  
  Conformer 2
(PDB)
1aip (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 101 0.63   58 - 111   148 - 194
2 36 0.83   112 - 147

Sequence


           ______________________________________________________________________________________________________106_______________ 
 1tfe    : *****************************************************AREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKE 
         :                                                                                                                          
 1aip(C) : SQMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKE 
           ______________________________________________________________________________________________________106_______________ 

           _____________________145___________________________________________________                                              
 1tfe    : RQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA                                              
         :                                                                                                                          
 1aip(C) : RQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA                                              
           _____________________145___________________________________________________                                              

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
20.6
Translation
(A)
0.7
Closure
(%)
47.6
Bending Residues
( green )
  106 - 112
  145 - 149
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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