Eosinophil-Derived Neurotoxin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Eosinophil-Derived Neurotoxin
  Conformer 1
(PDB)
1hi3 (A)
  Conformer 2
(PDB)
2bex (C)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 92 0.79   4 - 45   77 - 107   110 - 128
2 35 0.73   46 - 76   108 - 109   129 - 130

Sequence


           ____________________________________________45_____________________________76____________________________107____________ 
 1hi3(A) : MKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRD 
         :                                                                                                                          
 2bex(C) : MKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRD 
           ____________________________________________45_____________________________76____________________________107____________ 

           ______128______                                                                                                          
 1hi3(A) : PPQYPVVPVHLDRII                                                                                                          
         :                                                                                                                          
 2bex(C) : PPQYPVVPVHLDRII                                                                                                          
           ______128______                                                                                                          

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.8
Translation
(A)
-0.2
Closure
(%)
99.7
Bending Residues
( green )
  45 - 46
  76 - 77
  107 - 110
  128 - 129
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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