Exopolyphosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Exopolyphosphatase
  Conformer 1
(PDB)
1u6z (A)
  Conformer 2
(PDB)
2flo (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 275 0.72   14 - 125   131 - 155   160 - 303   313 - 314   396 - 396
2 200 0.86   126 - 130   156 - 159   304 - 312   315 - 395   397 - 504

Sequence


           ________________________________________________________________________________________________________________125__130 
 1u6z(A) : *EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVE 
         :                                                                                                                          
 2flo(C) : QEFAAVDLGSNSFH-vIARVVDGA-qIIGRLKQRVHLADGLGPDN-lSEEA-tRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIF-gVE 
           ________________________________________________________________________________________________________________125__130 

           ______________________155_159___________________________________________________________________________________________ 
 1u6z(A) : HTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPERLEKLVKEVL 
         :                                                                                                                          
 2flo(C) : HTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRR-gCVSFAQLYFPGGVINKENFQRAR-aAAQKLETLTWQFRIQGWNVA-gASGTIKAAHEVLe--gEKDGIITPERLEKLVKEVL 
           ______________________155_159___________________________________________________________________________________________ 

           __________________________________________________303__308______________________________________________________________ 
 1u6z(A) : RHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLH 
         :                                                                                                                          
 2flo(C) : RHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYE-eGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTq--yEQWREQQPKLAHPQLEALLRWAA-lH 
           __________________________________________________303__308______________________________________________________________ 

           ______________________395_______________________________________________________________________________________________ 
 1u6z(A) : EVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQ 
         :                                                                                                                          
 2flo(C) : EVGLNINHSGLHRHSAYILQNSDLPGFNQEQQL--aTLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQ 
           ______________________395_______________________________________________________________________________________________ 

           ___________________                                                                                                      
 1u6z(A) : EYWEGVAGWRLKIEEESTP                                                                                                      
         :                                                                                                                          
 2flo(C) : EYWEGVAGWRLKIEEE***                                                                                                      
           ___________________                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.2
Translation
(A)
0.3
Closure
(%)
61.6
Bending Residues
( green )
  125 - 126
  130 - 131
  155 - 156
  159 - 160
  303 - 304
  308 - 315
  395 - 397
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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