Fructose 1-Phosphate Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Fructose 1-Phosphate Kinase
  Conformer 1
(PDB)
2jg5 (A)
  Conformer 2
(PDB)
2jg5 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 258 0.66   3 - 10   36 - 86   106 - 304
2 44 0.75   11 - 35   87 - 105

Sequence


           _______8_________________________35_________________________________________________86________________105_______________ 
 2jg5(A) : MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEINAPGPHITSTQFEQLLQQI 
         :                                                                                                                          
 2jg5(B) : MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEINAPGPHITSTQFEQLLQQI 
           _______8_________________________35_________________________________________________86________________105_______________ 

           ________________________________________________________________________________________________________________________ 
 2jg5(A) : KNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGK 
         :                                                                                                                          
 2jg5(B) : KNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGK 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________                                                       
 2jg5(A) : VVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDEDLATRDAIEKIKSQVTISVLDGE                                                       
         :                                                                                                                          
 2jg5(B) : VVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDEDLATRDAIEKIKSQVTISVLDGE                                                       
           __________________________________________________________________                                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
15.4
Translation
(A)
0.6
Closure
(%)
99.6
Bending Residues
( green )
  8 - 11
  35 - 41
  86 - 87
  105 - 106
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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