Gelsolin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Gelsolin
  Conformer 1
(PDB)
2fh4 (C)
  Conformer 2
(PDB)
2fh2 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 225 0.8   416 - 641   721 - 724   726 - 727   729 - 733
2 77 0.72   642 - 720   725 - 725   728 - 728   734 - 736

Sequence


           ________________________________________________________________________________________________________________________ 
 2fh4(C) : **DDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNY------gQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTS----qT 
         :                                                                                                                          
 2fh2(A) : MDDDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQT 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________________________________________________________________641__________ 
 2fh4(C) : APASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLRAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKMDAHPPRLFACSNKIGR 
         :                                                                                                                          
 2fh2(A) : APASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLRAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKM--hPPRLFACSNKIGR 
           ___________________________________________________________________________________________________________641__________ 

           __________________________________________________________________720_724______733________                               
 2fh4(C) : FVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVKQGFEPPSFVGWFLGWDDDYW                               
         :                                                                                                                          
 2fh2(A) : FVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETD-------tPITVVKQGFEPPSFVGWFLGWDDDYW                               
           __________________________________________________________________720_724______733________                               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.4
Translation
(A)
-0.3
Closure
(%)
95.7
Bending Residues
( green )
  641 - 642
  720 - 721
  724 - 729
  733 - 734
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download