Glga Glycogen Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glga Glycogen Synthase
  Conformer 1
(PDB)
2bis (B)
  Conformer 2
(PDB)
2bis (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 233 0.28   1 - 196   202 - 210   214 - 218   413 - 435
2 202 0.69   197 - 201   211 - 213   219 - 412

Sequence


           ________________________________________________________________________________________________________________________ 
 2bis(B) : GSHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE 
         :                                                                                                                          
 2bis(A) : GSHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________________________________196__201______210_____218___________________ 
 2bis(B) : EPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERK 
         :                                                                                                                          
 2bis(A) : EPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERK 
           ____________________________________________________________________________196__201______210_____218___________________ 

           ________________________________________________________________________________________________________________________ 
 2bis(B) : KSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA 
         :                                                                                                                          
 2bis(A) : KSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________412_________________________                                         
 2bis(B) : SAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFDFIL                                         
         :                                                                                                                          
 2bis(A) : SAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFDFIL                                         
           ____________________________________________________412_________________________                                         

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.9
Translation
(A)
-0.2
Closure
(%)
98.6
Bending Residues
( green )
  196 - 197
  201 - 204
  210 - 211
  213 - 214
  218 - 219
  412 - 413
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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