Glutathione Synthetase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glutathione Synthetase
  Conformer 1
(PDB)
1m0w (A)
  Conformer 2
(PDB)
1m0t (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 387 0.66   8 - 354   418 - 489
2 58 0.48   355 - 417

Sequence


           ________________________________________________________________________________________________________________________ 
 1m0w(A) : *PSKDQLNELIQEVNQWAITNGLSMYPPKFEENPSNASVSPVTIYPTPIPRKCFDEAVQIQPVFNELYARITQDMAQPDSYLHKTTEALALSDSEFTGKLWSLYLATLKSAQYKKQNFRL 
         :                                                                                                                          
 1m0t(B) : PPSKDQLNELIQEVNQWAITNGLSMYPPKFEENPSNASVSPVTIYPTPIPRKCFDEAVQIQPVFNELYARITQDMAQPDSYL------------eFTGKLWSLYLATLKSAQYKKQNFRL 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1m0w(A) : GIFRSDYLIDKKKGTEQIKQVEFNTVSVSFAGLSEKVDRLHSYLNRANKYDPKGPIYNDQNMVISDSGYLLSKALAKAVESYKSQQs-----DPIVAFIVQRNERNVFDQKVLELNLLEK 
         :                                                                                                                          
 1m0t(B) : GIFRSDYLIDKK---eQIKQVEFNTVSVSFAGLSEKVDRLHSYLNRANKYDPKGPIYNDQNMVISDSGYLLSKALAKAVESYKSQQSSSTTSDPIVAFIVQRNERNVFDQKVLELNLLEK 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________________________________________________353___________ 
 1m0w(A) : FGTKSVRLTFDDVNDKLFIDDKTGKLFIRDTEQEIAVVYYRTGYTTTDYTSEKDWEARLFLEKSFAIKAPDLLTQLSGSKKIQQLLTDEGVLGKYISDAEKKSSLLKTFVKIYPLDDTKL 
         :                                                                                                                          
 1m0t(B) : FGTKSVRLTFDDVNDKLFIDDKTGKLFIRDTEQEIAVVYYRTGYTTTDYTSEKDWEARLFLEKSFAIKAPDLLTQLSGSKKIQQLLTDEGVLGKYISDAEKKSSLLKTFVKIYPLDDTKL 
           _________________________________________________________________________________________________________1353___________ 

           _________________________________________________416____________________________________________________________________ 
 1m0w(A) : GREGKRLALSEPSKYVLKPQREGGGNNVYKENIPNFLKGIEERHWDAYILMELIEPELNENNIILRDNKSYNEPIISELGIYGCVLFNDEQVLSNEFSGSLLRSKFNTSNEGGVAAGFGC 
         :                                                                                                                          
 1m0t(B) : GREGKRLALSEPSKYVLKPQ-----nNVYKENIPNFLKGIEERHWDAYILMELIEPELNENNIILRDNKSYNEPIISELGIYGCVLFNDEQVLSNEFSGSLLRSKF------------gC 
           ________________________________________________1416____________________________________________________________________ 

           _______                                                                                                                  
 1m0w(A) : LDSIILY                                                                                                                  
         :                                                                                                                          
 1m0t(B) : LDSIILY                                                                                                                  
           _______                                                                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
62.1
Translation
(A)
0.0
Closure
(%)
99.9
Bending Residues
( green )
  353 - 355
  416 - 423
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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