Guanine Deaminase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Guanine Deaminase
  Conformer 1
(PDB)
1wkq (A)
  Conformer 2
(PDB)
1tiy (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 107 0.41   5 - 112
2 41 1.0   113 - 153

Sequence


           ____________________________________________________________________________________________________________109_________ 
 1wkq(A) : HAMNHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSFIY 
         :                                                                                                                          
 1tiy(A) : ***NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCP-cLGAIYWARPKAVFYAAEHTDAAEAGFDDSFIY 
           ____________________________________________________________________________________________________________109_________ 

           _______________________________________                                                                                  
 1wkq(A) : KEIDKPAEERTIPFYQVTLTEHLSPFQAWRNFANKKEY*                                                                                  
         :                                                                                                                          
 1tiy(A) : KEIDKPAEERTIPFYQVTLTEHLSPFQAWRNFANKKEYL                                                                                  
           _______________________________________                                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.3
Translation
(A)
-0.3
Closure
(%)
84.2
Bending Residues
( green )
  109 - 113
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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