Heat Shock Locus U

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Heat Shock Locus U
  Conformer 1
(PDB) 		1do0 (C)
  Conformer 2
(PDB) 		1do0 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 204 1.26   4 - 112   241 - 335
2 82 0.19   117 - 234
3 106 0.44   336 - 441

Sequence


           ____________________________________________________________________________________________________________112_________ 
 1do0(C) : SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRY 
         :                                                                                                                          
 1do0(A) : SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRY 
           ____________________________________________________________________________________________________________112_________ 

           ________________________________________________________________________232_____________________________________________ 
 1do0(C) : RAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDaRKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGV 
         :                                                                                                                          
 1do0(A) : RAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDaRKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGV 
           ________________________________________________________________________232_____________________________________________ 

           _______________________________________________________335______________________________________________________________ 
 1do0(C) : QRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHT 
         :                                                                                                                          
 1do0(A) : QRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHT 
           _______________________________________________________335______________________________________________________________ 

           ______________________________________________                                                                           
 1do0(C) : VLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL                                                                           
         :                                                                                                                          
 1do0(A) : VLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL                                                                           
           ______________________________________________                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		24.2
Translation
(A) 		0.7
Closure
(%) 		95.9
Bending Residues
( green ) 		  112 - 118
  232 - 243
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		15.0
Translation
(A) 		0.1
Closure
(%) 		34.6
Bending Residues
( green ) 		  335 - 338
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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