Hemolin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hemolin
  Conformer 1
(PDB)
1bih (B)
  Conformer 2
(PDB)
1bih (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 288 0.92   10 - 209   303 - 390
2 93 0.21   210 - 302

Sequence


           ________________________________________________________________________________________________________________________ 
 1bih(B) : KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVL 
         :                                                                                                                          
 1bih(A) : KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVL 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________________________209___________________________________ 
 1bih(B) : PNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYP 
         :                                                                                                                          
 1bih(A) : PNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYP 
           __________________________________________________________________________________209___________________________________ 

           _________________________________________________296____________________________________________________________________ 
 1bih(B) : NYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVI 
         :                                                                                                                          
 1bih(A) : NYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVI 
           _________________________________________________296____________________________________________________________________ 

           _______________________________                                                                                          
 1bih(B) : KGVKNGDKGYYGCRATNEHGDKYFETLVQVN                                                                                          
         :                                                                                                                          
 1bih(A) : KGVKNGDKGYYGCRATNEHGDKYFETLVQVN                                                                                          
           _______________________________                                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.3
Translation
(A)
0.0
Closure
(%)
97.9
Bending Residues
( green )
  209 - 214
  296 - 303
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download