Hth-Type Transcriptional Regulator Lrpc

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hth-Type Transcriptional Regulator Lrpc
  Conformer 1
(PDB)
2cfx (D)
  Conformer 2
(PDB)
2cfx (G)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 77 0.28   62 - 138
2 56 0.47   6 - 61

Sequence


           ___________________________________________________________61___________________________________________________________ 
 2cfx(D) : MKLDQIDLNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYTLEVDQKKLGLPVSCIVEATVKNADYERFKSYIQTLPNIEFCYRIAGAACYMLKINAESLEAVEDFIN 
         :                                                                                                                          
 2cfx(G) : MKLDQIDLNIIEELKKDSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYTLEVDQKKLGLPVSCIVEATVKNADYERFKSYIQTLPNIEFCYRIAGAACYMLKINAESLEAVEDFIN 
           ___________________________________________________________61___________________________________________________________ 

           ____________________                                                                                                     
 2cfx(D) : KTSPYAQTVTHVIFSEIDTK                                                                                                     
         :                                                                                                                          
 2cfx(G) : KTSPYAQTVTHVIFSEIDTK                                                                                                     
           ____________________                                                                                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.1
Translation
(A)
0.7
Closure
(%)
74.1
Bending Residues
( green )
  61 - 63
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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