Hypothetical Protein Ef2904

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hypothetical Protein Ef2904
  Conformer 1
(PDB)
2az4 (B)
  Conformer 2
(PDB)
2az4 (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 258 0.97   8 - 8   15 - 15   17 - 18   92 - 97   147 - 152   162 - 191   199 - 201   210 - 390   394 - 396   400 - 400   403 - 426
2 161 0.61   9 - 14   16 - 16   19 - 91   98 - 146   153 - 161   192 - 198   202 - 209   391 - 393   397 - 399   401 - 402

Sequence


           ____8____14___________________________________________________________________________91____97__________________________ 
 2az4(B) : KAKTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSHAHLDHSRMINYLDPAVPLYTLKETKMILNSL 
         :                                                                                                                          
 2az4(A) : *AKTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSHAHLDHSRMINYLDPAVPLYTLKETKMILNSL 
           ____8____14___________________________________________________________________________91____97__________________________ 

           ____________________146___152______161___________________________191____198________209__________________________________ 
 2az4(B) : NRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFCEKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQH 
         :                                                                                                                          
 2az4(A) : NRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFCEKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQH 
           ____________________146___152______161___________________________191____198________209__________________________________ 

           ________________________________________________________________________________________________________________________ 
 2az4(B) : LVRLELENPNRQITFNGYPANVERFAKIIEKSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTLLKDKTDYLWQVVNQFDNLQEGSLYIHSDAQPLGDFDPQYRVF 
         :                                                                                                                          
 2az4(A) : LVRLELENPNRQITFNGYPANVERFAKIIEKSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNPALEIPYDTLLKDKTDYLWQVVNQFDNLQEGSLYIHSDAQPLGDFDPQYRVF 
           ________________________________________________________________________________________________________________________ 

           ________________________390___396_________________________________                                                       
 2az4(B) : LDLLAKKDITFVRLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLENPYGERILPERGEQIVL                                                       
         :                                                                                                                          
 2az4(A) : LDLLAKKDITFVRLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLENPYGERILPERGEQIVL                                                       
           ________________________390___396_________________________________                                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.2
Translation
(A)
0.2
Closure
(%)
35.2
Bending Residues
( green )
  8 - 9
  14 - 19
  91 - 92
  97 - 98
  146 - 147
  152 - 153
  161 - 162
  191 - 192
  198 - 199
  201 - 202
  209 - 210
  390 - 391
  393 - 394
  396 - 397
  399 - 403
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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