Hypothetical Protein Rv1264/mt1302

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hypothetical Protein Rv1264/mt1302
  Conformer 1
(PDB) 		1y10 (B)
  Conformer 2
(PDB) 		1y10 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 113 0.88   58 - 156   158 - 158   160 - 172
2 35 0.88   22 - 54   157 - 157   159 - 159
3 195 1.29   177 - 374

Sequence


           _______________________________________54_______________________________________________________________________________ 
 1y10(B) : ******LGGTARAERAKLVEWLLEQGITPDEIRATNPPLLLATRHLVGDDGTYVSAREISENYGVDLELLQRVQRAVGLARVDDPDAVVHMRADGEAAARAQRFVELGLNPDQVVLVVRV 
         :                                                                                                                          
 1y10(A) : DDLLGDLGGTARAERAKLVEWLLEQGITPDEIRATNPPLLLATRHLVGDDGTYVSAREISENYGVDLELLQRVQRAVGLARVDDPDAVVHMRADGEAAARAQRFVELGLNPDQVVLVVRV 
           _______________________________________54_______________________________________________________________________________ 

           ________________152_________164_________________________________________________________________________________________ 
 1y10(B) : LAEGLSHAAEAMRYTALEAIMRPGATELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLAGLARDLT 
         :                                                                                                                          
 1y10(A) : LAEGLSHAAEAMRYTALEAIMRPGATELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLAGLARDLT 
           ________________152_________164_________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1y10(B) : APPVWFIKTIGDAVMLVCPDPAPLLDTVLKLVEVVDTDNNFPRLRAGVASGMAVSRAGDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEADGFQWSFAGPRRLRGIRGDVRLFR 
         :                                                                                                                          
 1y10(A) : APPVWFIKTIGDAVMLVCPDPAPLLDTVLKLVEVVDTDNNFPRLRAGVASGMAVSRAGDWFGSPVNVASRVTGVARPGAVLVADSVREALGDa---DGFQWSFAGPRRLRGIRGDVRLFR 
           ________________________________________________________________________________________________________________________ 

           ___                                                                                                                      
 1y10(B) : VRR                                                                                                                      
         :                                                                                                                          
 1y10(A) : VRR                                                                                                                      
           ___                                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.5
Translation
(A) 		-1.7
Closure
(%) 		100.0
Bending Residues
( green ) 		  54 - 58
  152 - 160
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		4.3
Translation
(A) 		0.7
Closure
(%) 		99.0
Bending Residues
( green ) 		  164 - 184
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download