Lectin-C

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Lectin-C
  Conformer 1
(PDB)
1ulk (B)
  Conformer 2
(PDB)
1ulk (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 81 0.57   203 - 283
2 40 0.26   284 - 323

Sequence


           ________________________________________________________________________________283_____________________________________ 
 1ulk(B) : APVCGVRASGRVCPDGYCCSQWGYCGTTEEYCGKGCQSQCDYNRCGKEFGGKECHDELCCSQYGWCGNSDGHCGEGCQSQCSYWRCGKDFGGRLCTEDMCCSQYGWCGLTDDHCEDGCQS 
         :                                                                                                                          
 1ulk(A) : APVCGVRASGRVCPDGYCCSQWGYCGTTEEYCGKGCQSQCDYNRCGKEFGGKECHDELCCSQYGWCGNSDGHCGEGCQSQCSYWRCGKDFGGRLCTEDMCCSQYGWCGLTDDHCEDGCQS 
           _________________________________________________________________________________83_____________________________________ 

           ______                                                                                                                   
 1ulk(B) : QCDLPT                                                                                                                   
         :                                                                                                                          
 1ulk(A) : QCDLPT                                                                                                                   
           ______                                                                                                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
13.9
Translation
(A)
0.3
Closure
(%)
88.4
Bending Residues
( green )
  283 - 284
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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