Leukocyte Immunoglobulin-Like Receptor 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Leukocyte Immunoglobulin-Like Receptor 1
  Conformer 1
(PDB)
1p7q (D)
  Conformer 2
(PDB)
1ugn (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 85 0.83   96 - 181   186 - 196
2 84 0.73   6 - 95   182 - 185

Sequence


           _____________________________________________________________________________________________95_________________________ 
 1p7q(D) : ***PKPTLWAEPGSVITQGSPVTLRCQ----tQEYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHAGRYRCYY------rSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTL 
         :                                                                                                                          
 1ugn(A) : GHLPKPTLWAEPGSVITQGSPVTLRCQGGQETQEYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTL 
           _____________________________________________________________________________________________95_________________________ 

           _______________________________________________________180__________________                                             
 1p7q(D) : QCDSQVAFDGFILCKEGEhPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVLG                                             
         :                                                                                                                          
 1ugn(A) : QCDSQVAFDGFILCKE----qCLNS------sSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVLG                                             
           _______________________________________________________180__________________                                             

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
21.8
Translation
(A)
-0.5
Closure
(%)
95.2
Bending Residues
( green )
  95 - 98
  180 - 186
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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