Lipase Chaperone

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Lipase Chaperone
  Conformer 1
(PDB)
2es4 (E)
  Conformer 2
(PDB)
2es4 (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 188 0.67   55 - 190   217 - 276
2 23 0.79   191 - 216
3 52 0.5   277 - 328

Sequence


           ________________________________________________________________________________________________________________________ 
 2es4(E) : MPLPAALPGALAGSHAPRLPLAAGGRLARTRAVREFFDYlTAQGELTPAALDALVRREIAAQLDGSPAQAEALGVWRRYRAYFDALAQLPGDGAVLGDKLDPAAMQLALDQRAALADRTL 
         :                                                                                                                          
 2es4(D) : MPLPAALPGALAGSHAPRLPLAAGGRLARTRAVREFFDYlTAQGELTPAALDALVRREIAAQLDGSPAQAEALGVWRRYRAYFDALA-------vLGDKLDPAAMQLALDQRAALADRTL 
           ________________________________________________________________________________________________________________________ 

           ______________190_______________________216_________________________________________________________276_________________ 
 2es4(E) : GEWAEPFFGDEQRRQRHDLERIRIANDTTLSPEQKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQAYAAERDRI 
         :                                                                                                                          
 2es4(D) : GEWAEPFFGDEQRRQRHDLERIRIANDt-LS--qKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAWQTRYQAYAAERDRI 
           ______________190_______________________216_________________________________________________________276_________________ 

           _______________________________________                                                                                  
 2es4(E) : AAQGLAPQDRDARIAQLRQQTFTAPGEAIRAASLDRG**                                                                                  
         :                                                                                                                          
 2es4(D) : AAQGLAPQDRDARIAQLRQQTFTAPGEAIRAASLDRGAG                                                                                  
           _______________________________________                                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.8
Translation
(A)
-0.5
Closure
(%)
98.3
Bending Residues
( green )
  190 - 191
  216 - 217
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
10.3
Translation
(A)
-0.6
Closure
(%)
94.0
Bending Residues
( green )
  276 - 277
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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