Low Affinity Immunoglobulin Gamma Fc Region Receptor III-B

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Low Affinity Immunoglobulin Gamma Fc Region Receptor III-B
  Conformer 1
(PDB)
1fnl (A)
  Conformer 2
(PDB)
1t83 (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 91 0.85   7 - 88   91 - 93   111 - 113   161 - 163
2 72 0.94   89 - 90   94 - 110   114 - 160   164 - 169

Sequence


           ____________________________________________________________________________________88___93______________110____________ 
 1fnl(A) : EDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVT 
         :                                                                                                                          
 1t83(C) : **LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVT 
           ____________________________________________________________________________________88___93______________110____________ 

           ___________________________________160_______________                                                                    
 1fnl(A) : YLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQA                                                                    
         :                                                                                                                          
 1t83(C) : YLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNIT****                                                                    
           ___________________________________160_______________                                                                    

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.9
Translation
(A)
-0.3
Closure
(%)
78.1
Bending Residues
( green )
  88 - 91
  93 - 94
  110 - 111
  113 - 117
  160 - 161
  163 - 164
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download