Citrate Synthase (E.C.4.1.3.7)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-55   SER-56  5.7 6.2 -16.4 5.0 60.1 67.5 20.4
 SER-56   VAL-57  2.5 2.8 24.6 -18.6 66.3 63.6 20.0
 VAL-57   LEU-58  2.5 2.6 3.7 -31.2 127.0 128.3 91.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-63   ILE-64  7.3 6.9 -25.7 26.7 60.6 59.2 67.2
 ILE-64   ARG-65  3.6 3.2 -2.9 -13.1 75.2 67.9 55.5
 ARG-65   PHE-66  3.0 2.6 -5.7 -1.1 82.6 83.2 22.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-273   HIS-274  18.2 17.4 -7.2 15.6 107.6 115.1 32.1
 HIS-274   GLY-275  15.1 14.4 -75.8 21.6 43.7 42.3 182.2
 GLY-275   LEU-276  13.6 12.3 6.1 24.1 139.9 164.1 -96.2
 LEU-276   ALA-277  14.1 14.3 -57.5 76.0 83.1 68.4 -103.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-279   GLU-280  11.3 12.1 6.3 -5.6 85.5 73.3 57.6
 GLU-280   VAL-281  14.0 14.7 -1.1 10.3 111.0 108.9 -24.0
 VAL-281   LEU-282  12.3 12.6 -12.2 0.2 157.4 166.9 -60.9
 LEU-282   VAL-283  10.3 11.1 -2.9 7.7 134.2 125.6 67.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-332   GLN-333  7.2 6.8 1.1 16.5 17.1 19.8 43.5
 GLN-333   ARG-334  5.6 5.1 -21.9 13.4 128.7 131.9 -40.0
 ARG-334   GLU-335  8.9 8.5 6.3 -13.5 80.6 78.6 -49.1
 GLU-335   PHE-336  10.9 10.1 0.3 -4.7 132.5 127.1 4.7
 GLU-335   PHE-336  10.9 10.1 0.3 -4.7 132.5 127.1 4.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-335   PHE-336  10.9 10.1 0.3 -4.7 132.5 127.1 4.7
 GLU-335   PHE-336  10.9 10.1 0.3 -4.7 132.5 127.1 4.7
 PHE-336   ALA-337  8.8 7.9 15.3 -7.5 157.5 160.7 -59.3
 ALA-337   LEU-338  8.4 7.7 -5.7 0.8 69.2 71.6 20.9
 LEU-338   LYS-339  12.2 11.5 5.5 0.1 113.6 106.9 5.2
 LYS-339   HIS-340  12.8 12.1 0.3 8.5 149.5 146.6 -53.5
 HIS-340   LEU-341  10.5 9.6 8.8 -23.4 137.8 141.3 78.3
 LEU-341   PRO-342  8.7 8.0 -6.7 4.6 89.2 87.9 5.4
 LEU-341   PRO-342  8.7 8.0 -6.7 4.6 89.2 87.9 5.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-341   PRO-342  8.7 8.0 -6.7 4.6 89.2 87.9 5.4
 LEU-341   PRO-342  8.7 8.0 -6.7 4.6 89.2 87.9 5.4
 PRO-342   HIS-343  11.9 11.0 10.3 6.1 45.6 43.4 68.8
 HIS-343   ASP-344  11.9 11.0 -35.9 25.1 108.9 106.4 -13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-345   MET-346  9.9 9.8 10.4 14.1 36.1 45.5 44.4
 MET-346   PHE-347  8.8 8.7 -7.4 4.4 159.4 151.2 17.3
 PHE-347   LYS-348  8.7 8.6 -8.3 -1.9 88.4 92.5 -51.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-373   VAL-374  9.3 9.8 -36.8 46.0 106.8 130.4 -40.5
 VAL-374   ASP-375  5.7 6.3 -8.6 8.1 153.6 151.8 -26.5
 ASP-375   ALA-376  7.3 8.2 5.7 -10.9 30.9 39.7 -2.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-377   SER-378  6.2 6.4 43.9 -28.0 118.3 107.3 4.2
 SER-378   GLY-379  3.0 3.8 2.2 -2.4 154.7 158.1 -24.8
 GLY-379   VAL-380  4.8 5.2 -6.3 14.1 33.5 41.5 -14.9
 VAL-380   LEU-381  4.4 4.6 -7.2 14.8 79.7 81.5 -10.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees