Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-32   PRO-33  11.5 10.1 13.3 -40.6 147.5 144.4 96.0
 PRO-33   SER-34  8.5 7.3 -32.1 25.8 70.1 80.0 73.5
 SER-34   GLN-35  8.9 8.6 9.2 13.2 80.9 82.0 84.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-89   ASN-90  2.5 3.1 9.5 -16.1 72.8 66.8 -60.5
 ASN-90   GLU-91  4.4 4.9 14.8 5.0 7.7 7.9 108.8
 GLU-91   LYS-92  5.0 5.3 -4.7 10.4 116.9 114.3 52.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-104   LYS-105  5.8 6.1 -9.9 15.3 115.5 115.7 7.8
 LYS-105   LEU-106  3.8 3.6 -2.3 0.4 117.9 119.3 -37.8
 LEU-106   GLU-107  1.7 1.3 37.6 -41.5 101.7 102.2 11.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-121   TYR-122  0.8 1.4 23.5 -15.9 67.3 69.3 39.9
 TYR-122   VAL-123  3.8 4.4 -24.7 37.5 130.4 129.9 54.5
 VAL-123   ALA-124  6.0 6.5 -22.9 26.3 113.0 119.4 69.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-315   PRO-316  12.7 13.8 46.9 -65.3 93.6 87.5 -30.9
 PRO-316   LYS-317  12.5 12.6 9.0 -46.6 121.9 126.3 116.3
 LYS-317   PHE-318  11.3 11.3 -16.8 -38.5 119.2 116.2 -162.1
 PHE-318   LYS-319  8.0 8.9 53.7 7.9 77.3 136.5 -132.3
 LYS-319   GLY-320  10.4 9.9 -150.5 -107.4 123.7 92.9 183.0
 GLY-320   PRO-321  9.5 7.6 -53.3 32.5 149.0 163.0 -133.9
 PRO-321   GLY-322  11.8 6.4 44.3 154.4 91.7 50.0 570.3
 GLY-322   ASP-323  14.6 8.4 -83.8 13.3 150.9 66.8 -12.8
 ASP-323   THR-324  17.4 10.6 -63.1 69.6 96.9 133.3 110.2
 ILE-335   ARG-336  19.2 18.8 35.6 61.9 53.5 43.3 492.8
 ARG-336   VAL-337  21.7 20.7 60.4 -85.5 30.4 58.4 -151.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees