IgG1 Fab Fragment (Anti-Lysozyme Antibody D1.3, Kappa) 3 - Lysozyme (E.C.3.2.1.17)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue i
Residue i+1
Distance of hinge axis to residue i in conformer 1 (A)
Distance of hinge axis to residue i in conformer 2 (A)
Change in psi (i) (deg)
Change in phi (i+1) (deg)
Angle of psi(i) axis to hinge axis conformer 1 (deg)
Angle of psi(i) axis to hinge axis conformer 2 (deg)
Percentage Progress
SER-115
SER-116
4.2
4.0
12.5
0.5
12.7
23.8
48.8
SER-116
ALA-117
4.3
3.1
-20.2
26.9
96.6
85.9
-3.2
ALA-117
SER-118
3.4
2.5
-21.8
38.6
114.4
100.5
21.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees