Vimentin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-206   ARG-207  12.3 12.2 5.8 7.7 129.9 133.5 -38.6
 ARG-207   GLN-208  10.4 10.4 -27.1 46.7 80.2 102.1 41.2
 GLN-208   ASP-209  10.3 9.4 -67.7 85.1 145.1 140.4 95.8
 ASP-209   VAL-210  8.9 8.1 -79.2 28.5 107.1 74.0 21.2
 VAL-210   ASP-211  5.6 6.2 -25.4 3.0 93.7 59.6 63.6
 ASP-211   ASN-212  3.8 4.4 7.7 -14.8 28.8 55.6 -62.7
 ASN-212   ALA-213  4.9 4.6 26.2 -7.6 58.0 54.4 85.1
 ALA-213   SER-214  2.3 1.8 -0.7 12.7 66.2 56.0 -29.5

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees