Damage-Specific DNA Binding Protein 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ASN-392   GLY-393  1.4 1.7 -23.1 156.3 165.3 174.2 92.2  GLY-393   ILE-394  0.7 1.3 -9.7 0.7 134.4 125.4 -2.4  ILE-394   GLY-395  1.0 0.8 7.1 6.0 69.7 65.9 4.1 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ILE-704   ASP-705  4.2 3.9 1.0 -4.8 46.9 46.3 -0.9  ASP-705   GLU-706  5.8 5.8 122.3 93.2 82.4 59.0 133.1  GLU-706   ILE-707  7.2 5.2 -166.3 6.0 93.6 140.6 -57.3  ILE-707   GLN-708  6.3 6.4 178.5 -36.0 22.8 50.7 102.5  GLN-708   LYS-709  6.9 3.6 -13.2 -88.8 105.0 119.9 -72.3  LYS-709   LEU-710  4.7 4.0 -154.6 18.1 114.5 108.6 -27.6  LEU-710   HIS-711  4.1 3.5 2.7 -16.1 122.6 116.1 -3.1 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees