Atp-Dependent Molecular Chaperone Hsp82

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-480   ALA-481  7.9 6.8 -17.2 -10.7 38.2 50.7 33.0
 ALA-481   VAL-482  6.6 4.7 -91.6 117.6 93.8 101.6 136.0
 VAL-482   GLU-483  3.1 2.9 14.5 -33.8 15.7 43.1 -135.1
 GLU-483   LYS-484  3.6 1.0 52.7 13.5 70.3 107.8 0.8
 LYS-484   SER-485  4.4 3.0 -21.7 22.9 40.4 53.9 -34.1
 SER-485   PRO-486  4.1 2.7 17.1 -4.8 84.9 70.7 57.1
 PRO-486   PHE-487  6.0 6.5 -39.2 -18.9 40.5 104.6 67.5
 PHE-487   LEU-488  4.6 7.4 33.3 58.6 64.5 15.5 468.0
 LEU-488   ASP-489  5.7 6.5 -106.2 33.7 163.0 122.9 -359.6
 ASP-489   ALA-490  6.8 8.6 -13.4 20.3 110.5 104.6 -44.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-495   PHE-496  10.8 11.6 5.0 20.2 73.6 75.2 54.5
 PHE-496   GLU-497  10.6 12.0 -72.6 80.5 93.3 99.9 -16.6
 GLU-497   VAL-498  8.6 10.0 -2.9 18.6 154.8 165.4 67.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-515   PHE-516  23.4 22.9 69.6 -17.1 45.8 40.2 221.0
 PHE-516   GLU-517  22.5 23.0 -158.5 172.2 146.3 129.8 -23.2
 GLU-517   GLY-518  24.7 24.4 -102.8 -157.2 87.0 55.9 -299.5
 GLY-518   LYS-519  25.2 22.7 -176.3 17.5 75.0 36.9 761.8
 LYS-519   THR-520  21.4 21.5 1.8 -5.6 158.5 83.3 5.2
 THR-520   LEU-521  19.8 18.2 -27.6 -28.2 92.1 37.9 -856.2
 LEU-521   VAL-522  16.5 15.6 14.5 79.1 130.6 90.6 512.1
 VAL-522   ASP-523  14.0 12.0 -9.4 40.9 101.3 92.1 201.8
 ASP-523   ILE-524  10.3 10.7 84.1 61.4 106.2 136.6 -521.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-582   PHE-583  16.4 16.1 -1.8 9.7 128.5 132.3 17.7
 PHE-583   GLY-584  18.1 18.2 20.2 -33.0 39.6 39.5 -43.5
 GLY-584   TRP-585  15.0 15.3 2.0 -8.5 113.6 116.5 27.4
 TRP-585   SER-586  12.4 13.1 -11.6 0.5 108.1 106.4 50.2
 TRP-585   SER-586  12.4 13.1 -11.6 0.5 108.1 106.4 50.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-585   SER-586  12.4 13.1 -11.6 0.5 108.1 106.4 50.2
 TRP-585   SER-586  12.4 13.1 -11.6 0.5 108.1 106.4 50.2
 SER-586   ALA-587  9.3 10.1 8.5 16.5 128.4 117.8 -66.5
 ALA-587   ASN-588  5.8 6.5 -5.5 11.1 98.4 93.1 64.6
 ASN-588   MET-589  5.6 7.3 9.1 -21.3 110.1 131.9 22.7
 MET-589   GLU-590  9.3 10.2 7.9 -2.8 166.3 154.6 -32.8
 GLU-590   ARG-591  8.1 7.9 2.0 11.8 95.9 93.6 -26.0
 ARG-591   ILE-592  6.1 6.4 -11.3 13.7 90.7 74.0 -5.1
 ILE-592   MET-593  9.8 10.1 1.2 -4.3 129.6 157.6 11.7
 MET-593   LYS-594  12.0 10.9 -1.8 -0.3 21.6 50.1 21.7
 LYS-594   ALA-595  9.7 7.7 7.0 -19.9 90.8 92.4 -26.7
 ALA-595   GLN-596  10.1 9.3 35.5 31.5 115.3 127.9 -214.4
 GLN-596   ALA-597  13.7 12.1 -168.9 86.3 57.9 14.7 451.4
 LYS-611   THR-612  11.7 10.6 -2.3 24.0 103.6 105.4 27.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees