Chitin Oligosaccharide Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-240   PRO-241  7.2 7.3 -2.6 2.9 48.5 45.7 3.2
 PRO-241   ALA-242  7.2 7.2 -18.5 4.8 70.8 75.6 16.4
 ALA-242   ALA-243  4.5 4.0 3.0 -5.7 130.3 136.8 10.0
 ALA-243   GLY-244  1.6 2.0 -16.0 -17.0 64.5 68.3 26.4
 GLY-244   THR-245  2.0 2.2 41.1 -0.4 63.5 54.0 45.0
 THR-245   GLN-246  5.2 5.5 7.2 -1.7 66.4 64.1 -1.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-482   MET-483  10.7 10.8 11.3 -12.1 100.2 102.5 1.2
 MET-483   SER-484  7.1 7.2 -1.5 0.0 133.2 133.1 1.0
 SER-484   GLY-485  3.8 3.9 -19.2 -21.9 49.5 47.8 53.8
 GLY-485   ALA-486  1.1 1.9 24.0 -29.1 98.5 77.3 10.2
 ALA-486   TRP-487  2.6 3.0 11.9 16.4 68.0 82.8 16.4
 TRP-487   MET-488  6.0 6.6 -44.0 31.5 34.4 32.1 18.5
 MET-488   TYR-489  8.3 8.1 5.3 6.8 78.8 77.0 4.1
 TYR-489   GLN-490  11.4 11.5 7.3 -2.2 144.9 144.0 -7.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees