Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-70   GLU-71  3.5 3.0 -27.1 40.2 37.8 44.6 10.2
 GLU-71   ILE-72  2.9 3.3 4.6 -31.8 148.8 149.8 293.9
 ILE-72   ARG-73  3.2 3.4 -19.2 19.9 60.6 57.8 -101.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-163   SER-164  10.0 9.9 -17.3 -12.8 21.5 21.1 317.0
 SER-164   ILE-165  10.5 9.9 14.6 -0.7 79.7 87.7 -98.9
 ILE-165   ALA-166  7.7 7.9 9.8 -15.4 134.1 136.1 -27.9
 ALA-166   LEU-167  9.8 10.3 20.8 -23.5 120.4 121.9 34.0
 LEU-167   PRO-168  7.6 8.0 -15.1 -2.7 17.3 15.2 206.4
 PRO-168   ALA-169  8.5 8.3 -32.2 48.3 59.8 74.2 -71.5
 ALA-169   LEU-170  6.2 5.5 9.5 -33.4 110.1 108.3 193.4
 LEU-170   ALA-171  6.0 6.2 -45.1 -8.6 128.8 110.0 -298.7
 ALA-171   GLU-172  7.5 8.9 -18.2 35.6 55.3 57.6 48.9
 GLU-172   LYS-173  11.1 12.1 21.9 -16.8 124.1 96.9 -23.0
 LYS-173   ASP-174  11.1 11.5 -9.4 -32.3 49.1 50.9 316.9
 ASP-174   LYS-175  7.6 8.5 29.1 0.6 148.5 156.2 -289.1
 LYS-175   GLN-176  9.5 9.4 7.9 -1.1 128.8 133.4 -37.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees