Mitogen-Activated Protein Kinase 8

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-75   LEU-76  7.5 7.2 -0.6 6.1 71.9 74.3 -12.0
 LEU-76   MET-77  5.3 4.5 -18.9 13.0 39.8 44.2 22.7
 MET-77   LYS-78  4.6 4.0 6.3 3.5 69.8 70.5 9.8
 LYS-78   CYS-79  5.0 5.2 -32.4 26.6 119.6 114.4 -15.5
 CYS-79   VAL-80  1.8 2.9 -13.7 6.9 60.8 57.1 4.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-85   ILE-86  4.5 4.3 -8.5 19.6 118.8 114.2 19.8
 ILE-86   GLY-87  1.5 1.1 -17.4 0.8 53.5 53.6 52.5
 GLY-87   LEU-88  2.2 2.8 1.3 6.4 82.0 83.6 8.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-109   LEU-110  3.6 3.4 2.9 -17.7 132.7 135.4 80.8
 LEU-110   MET-111  2.4 2.4 -2.5 -1.6 72.7 66.5 29.8
 MET-111   ASP-112  1.4 1.3 3.6 -3.8 160.2 159.1 22.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-331   ALA-332  15.4 14.7 31.6 -26.1 98.8 101.7 -6.5
 ALA-332   PRO-333  12.4 12.1 -20.3 15.6 38.0 39.7 37.6
 PRO-333   PRO-334  10.0 10.3 7.9 13.8 83.1 79.5 -0.7
 PRO-334   PRO-335  7.4 6.8 11.2 -10.7 86.9 81.1 -19.3
 PRO-335   LYS-336  3.6 3.6 167.1 -78.2 156.7 141.8 -416.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees