Alcohol Dehydrogenase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-154   GLY-155  11.5 11.8 11.5 -14.7 90.3 89.9 12.0
 GLY-155   ILE-156  8.2 8.5 3.0 -5.0 141.6 139.1 15.9
 ILE-156   THR-157  6.0 6.3 11.7 -10.0 149.2 151.6 -14.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-244   VAL-245  17.3 17.4 -3.1 -20.2 55.1 52.7 93.5
 VAL-245   SER-246  17.7 17.4 44.2 -6.4 81.9 103.1 25.4
 SER-246   VAL-247  21.3 21.2 37.6 -26.6 32.3 72.1 94.9
 VAL-247   SER-248  21.9 23.2 31.0 -53.4 50.6 51.0 -73.9
 SER-248   GLU-249  25.0 25.2 7.4 -19.0 32.1 29.7 -123.7
 GLU-249   ALA-250  24.6 24.7 9.6 -5.9 86.9 73.6 31.8
 ALA-250   ALA-251  26.9 26.7 10.9 -7.8 118.0 114.1 15.7
 ALA-251   ILE-252  24.6 24.4 3.7 5.3 56.7 56.2 39.1
 ILE-252   GLU-253  21.6 21.4 1.0 -16.0 39.8 33.5 -89.6
 GLU-253   ALA-254  23.7 23.2 7.7 -2.9 111.2 100.7 -3.7
 ALA-254   SER-255  25.1 24.8 2.7 1.6 104.1 102.7 -25.1
 SER-255   THR-256  21.6 21.5 16.9 -10.5 39.0 35.8 46.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-265   VAL-266  14.7 15.1 -13.2 10.9 78.9 80.6 59.4
 VAL-266   LEU-267  12.3 12.7 -2.8 8.1 79.2 77.4 -36.7
 LEU-267   VAL-268  13.8 14.4 -12.9 5.0 50.8 48.6 109.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-276   CYS-277  20.2 20.0 10.8 0.0 151.2 153.8 -57.3
 CYS-277   SER-278  22.2 22.0 0.3 19.9 86.1 87.0 -55.8
 SER-278   ASP-279  21.8 20.6 -33.3 6.9 26.0 26.8 207.4
 ASP-279   VAL-280  22.4 22.3 -4.9 6.9 81.3 66.9 -48.9
 VAL-280   PHE-281  19.1 19.5 -5.1 -6.8 76.8 78.6 3.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-293   TYR-294  8.5 9.1 -14.4 19.5 63.7 55.9 -52.6
 TYR-294   VAL-295  9.5 9.8 -31.7 11.7 29.3 30.3 150.7
 VAL-295   GLY-296  8.8 9.2 -2.5 11.1 91.8 95.4 4.5
 GLY-296   ASN-297  5.4 5.7 1.5 4.5 86.6 84.4 45.6
 GLY-296   ASN-297  5.4 5.7 1.5 4.5 86.6 84.4 45.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-296   ASN-297  5.4 5.7 1.5 4.5 86.6 84.4 45.6
 GLY-296   ASN-297  5.4 5.7 1.5 4.5 86.6 84.4 45.6
 ASN-297   ARG-298  5.8 6.2 7.3 -5.7 24.9 24.1 10.7
 ARG-298   ALA-299  7.1 7.1 12.2 -7.4 70.2 75.1 20.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-312   VAL-313  9.2 9.1 -13.8 3.1 115.4 111.6 -19.2
 VAL-313   LYS-314  8.9 9.3 17.4 -17.4 134.5 137.1 17.5
 LYS-314   SER-315  10.6 10.8 -48.3 59.9 112.7 111.4 58.9
 SER-315   PRO-316  13.1 13.1 20.4 -2.9 141.3 134.0 -109.8
 PRO-316   ILE-317  15.9 16.5 -10.9 7.8 104.7 90.6 -7.5
 ILE-317   LYS-318  16.9 17.0 -14.9 -0.2 45.9 45.5 63.0
 LYS-318   VAL-319  19.8 19.9 -3.4 5.5 88.6 89.6 5.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees