Antibody 7A1 Fab'

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-115   THR-116  5.6 6.0 -13.7 9.0 121.2 118.3 -24.7
 THR-116   THR-117  2.2 2.5 -2.9 -6.2 82.6 82.7 41.6
 THR-117   PRO-118  4.8 5.1 4.0 -1.8 61.6 60.3 38.7

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees