Succinyl-Coa Ligase [Gdp-Forming] Alpha-Chain, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-247   GLY-248  9.9 10.2 0.1 -6.7 70.7 68.0 -1.1
 GLY-248   LEU-249  7.1 7.6 -21.2 4.3 102.3 97.0 -6.7
 LEU-249   THR-250  5.7 6.1 11.3 6.3 22.7 14.6 19.7
 THR-250   ALA-251  5.2 6.3 -14.4 5.2 98.7 111.5 -4.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-271   LYS-272  3.5 3.8 -86.0 18.3 113.1 125.9 -59.8
 LYS-272   GLU-273  4.5 5.5 5.2 -2.0 19.7 21.5 2.2
 GLU-273   LYS-274  3.3 3.5 -18.2 -0.4 132.7 127.8 -19.5
 LYS-274   ILE-275  3.5 3.6 6.6 -2.3 80.4 83.1 -9.9
 ILE-275   THR-276  7.1 7.2 -19.6 0.9 124.8 132.8 -29.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees