Cannabinoid Receptor 1,Flavodoxin,cannabinoid Receptor 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-303   HIS-304  5.7 2.3 3.1 2.4 173.4 173.4 -3.5
 HIS-304   ALA-305  4.3 1.1 -50.4 -81.7 70.5 77.8 40.6
 ALA-305   VAL-306  6.3 4.3 -160.0 6.0 59.6 146.2 62.2
 VAL-306   ALA-1002  9.5 7.2 26.0 -39.8 116.9 125.8 14.3
 ALA-1002   LYS-1003  10.1 10.0 -88.8 -6.3 108.6 103.8 -4.7
 LYS-1003   ALA-1004  12.8 13.0 -4.4 7.2 39.5 36.2 -2.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-1144   ARG-1145  15.4 15.6 8.5 9.5 139.1 137.2 -16.8
 ARG-1145   GLY-1146  14.5 14.8 1.0 -13.0 66.5 83.2 -1.8
 GLY-1146   ALA-1147  12.8 11.7 55.4 11.8 78.7 92.8 17.4
 ALA-1147   ILE-1148  10.1 10.2 -171.6 64.0 33.2 53.4 88.7
 MET-337   ASP-338  7.1 11.5 2.8 -119.6 117.9 140.4 81.4
 ASP-338   ILE-339  8.6 8.9 -81.9 -15.1 29.8 43.6 95.0
 ILE-339   GLU-340  10.9 8.3 1.0 -14.1 112.3 122.0 6.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees