Replication Factor C Subunit 4

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-10   TRP-11  5.7 5.7 -5.5 8.0 67.5 70.4 -20.2
 TRP-11   VAL-12  2.3 2.2 -8.2 12.0 29.9 31.8 -139.3
 VAL-12   GLU-13  3.9 3.6 -24.8 28.0 101.8 101.4 109.8
 GLU-13   LYS-14  6.1 6.1 -10.9 14.2 121.6 117.6 126.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-163   SER-164  5.8 5.7 0.1 9.8 77.6 76.5 122.0
 SER-164   LYS-165  2.3 2.2 -6.7 0.0 33.4 34.4 212.5
 LYS-165   LEU-166  2.5 2.5 -4.3 3.9 69.4 69.4 2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-179   LYS-180  9.4 9.3 -3.4 1.7 116.2 117.7 -60.5
 LYS-180   LEU-181  11.6 11.6 -3.0 5.2 137.1 134.9 87.6
 LEU-181   GLU-182  9.3 9.3 6.0 -4.7 45.3 46.6 60.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-183   VAL-184  11.0 11.2 -0.7 0.0 85.1 82.3 80.2
 VAL-184   LYS-185  11.6 11.8 0.7 3.7 62.5 61.7 97.9
 LYS-185   TYR-186  15.1 15.2 5.8 -6.8 34.9 36.1 -68.9
 TYR-186   THR-187  15.9 15.9 -5.5 6.2 117.3 119.9 144.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-196   THR-197  13.5 13.5 6.0 -0.7 78.5 78.0 6.3
 THR-197   ALA-198  13.3 13.1 -14.9 13.3 85.3 81.8 48.4
 ALA-198   GLU-199  9.6 9.4 -5.6 3.2 22.0 21.5 61.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-204   ALA-205  7.7 7.8 1.5 0.7 107.9 106.3 -46.1
 ALA-205   ILE-206  6.8 6.8 -2.7 2.1 19.2 19.4 25.5
 ILE-206   ASN-207  4.6 4.6 -0.2 -0.3 49.8 49.4 36.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees