Glutamate Receptor Ionotropic, Nmda 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-144
GLY-145
4.2
4.7
15.4
2.7
50.7
56.5
57.0
GLY-145
LEU-146
0.8
1.1
5.6
-15.3
122.0
121.3
25.0
LEU-146
THR-147
2.9
2.6
-5.2
5.2
57.4
60.6
3.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-240
THR-241
6.3
6.3
-0.7
6.5
71.8
71.1
4.9
THR-241
GLY-242
9.4
9.4
-11.6
2.7
3.6
7.4
34.1
GLY-242
GLU-243
10.5
10.1
-173.9
130.2
60.2
65.2
116.8
GLU-243
LEU-244
9.5
7.5
63.7
-14.7
104.1
134.1
-116.9
LEU-244
PHE-245
5.8
5.0
-18.5
34.3
18.8
41.9
-70.2
PHE-245
PHE-246
5.0
6.2
-172.4
150.2
74.7
38.9
61.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees