Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
6.4
6.3
-3.7
3.3
36.2
36.5
15.5
THR-107
LEU-108
3.8
3.7
0.0
4.5
72.3
68.9
30.2
LEU-108
GLY-109
0.5
0.3
-24.1
8.4
40.2
45.0
69.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-211
ASP-212
8.1
8.2
-3.3
11.4
129.9
128.5
60.0
ASP-212
SER-213
4.7
5.0
4.4
-5.3
117.2
112.6
-3.8
SER-213
LYS-214
0.9
1.3
17.0
-2.9
86.7
86.2
54.7
LYS-214
GLY-215
3.4
3.3
-7.7
6.5
35.1
45.7
-4.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees