Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-452   MET-453  0.8 0.8 -2.0 -0.3 70.2 71.3 -37.8
 MET-453   ASN-454  3.6 3.6 -2.9 -3.6 46.9 45.9 70.1
 ASN-454   ASN-455  4.3 4.2 3.9 -2.7 123.3 120.9 -19.3
 ASN-455   GLY-456  6.4 6.4 1.2 -2.7 140.0 140.2 17.4
 GLY-456   THR-457  6.1 6.1 1.0 1.2 153.5 154.6 -52.2
 THR-457   TYR-458  4.1 4.0 -0.8 2.3 91.6 91.7 74.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-475   LEU-476  4.4 4.3 2.8 -3.8 134.4 133.4 6.2
 LEU-476   ASP-477  2.7 2.5 5.2 -4.4 152.0 149.4 -13.0
 ASP-477   VAL-478  5.3 5.2 0.9 -0.6 121.1 119.7 -21.4
 VAL-478   PRO-479  5.8 5.8 0.2 3.0 136.0 135.7 -42.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees