Virb11 Homolog

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-133   ILE-134  28.4 28.2 4.0 6.9 87.1 96.6 -5.0
 ILE-134   PRO-135  25.5 25.4 -41.7 29.9 118.5 124.7 -38.1
 PRO-135   SER-136  22.5 23.0 7.6 -0.6 123.4 115.2 -12.9
 SER-136   LYS-137  19.0 19.3 -42.7 47.5 100.8 90.5 -15.7
 LYS-137   THR-138  16.7 18.5 -48.2 28.5 58.9 72.2 19.9
 THR-138   THR-139  13.8 15.3 2.0 7.6 65.4 59.5 33.3
 THR-139   TYR-140  10.7 12.0 -7.1 -17.4 44.6 55.2 75.3
 TYR-140   PRO-141  8.8 9.2 9.5 -6.3 62.1 48.6 -2.1
 PRO-141   HIS-142  5.2 5.7 6.3 6.8 89.5 92.3 20.4
 HIS-142   SER-143  5.8 5.8 0.1 -6.5 146.2 143.9 20.5
 SER-143   PHE-144  4.4 4.3 1.7 -3.0 138.5 139.6 11.8

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees