Endo-1,4-Beta-Xylanase A

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-4   TYR-5  10.7 11.0 -2.9 -5.3 42.4 38.2 183.1
 TYR-5   TRP-6  8.1 8.3 2.5 -0.5 84.1 83.5 -34.3
 TRP-6   GLN-7  4.5 4.6 0.9 -8.0 125.3 128.8 81.6
 GLN-7   ASN-8  4.3 4.4 -1.9 7.9 78.2 80.8 -19.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-20   GLY-21  5.0 4.8 -2.6 4.2 59.8 56.5 7.7
 GLY-21   SER-22  7.5 7.1 -4.9 3.1 74.4 77.7 35.8
 SER-22   GLY-23  9.8 9.3 -2.0 -7.1 55.6 60.1 77.6
 GLY-23   GLY-24  9.3 9.0 4.6 -1.6 80.5 84.8 -19.4
 GLY-24   ASN-25  6.0 5.7 2.2 3.2 83.2 89.0 9.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-29   TRP-30  11.3 11.3 -6.8 5.9 34.8 37.3 42.1
 TRP-30   SER-31  12.7 12.7 0.4 9.2 93.2 91.5 -128.2
 SER-31   ASN-32  16.1 16.1 -15.7 -8.3 39.4 49.8 365.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-36   VAL-37  10.5 10.5 -0.2 -4.6 36.6 37.1 33.3
 VAL-37   VAL-38  8.4 8.4 -3.5 -2.9 91.7 91.9 24.9
 VAL-38   GLY-39  4.8 4.8 -11.6 6.6 33.2 29.0 52.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-56   VAL-57  6.4 6.5 -3.6 4.2 74.8 74.0 28.4
 VAL-57   TRP-58  9.1 9.1 -7.8 4.6 65.8 72.0 15.3
 TRP-58   ALA-59  10.1 10.2 16.1 -13.2 94.8 92.9 87.6
 ALA-59   PRO-60  13.6 13.6 -0.5 -4.8 30.7 33.8 104.9
 PRO-60   ASN-61  14.8 14.8 15.0 -4.3 84.8 87.2 751.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-62   ASN-63  19.7 19.9 4.5 -8.2 95.2 106.4 -261.9
 ASN-63   GLY-64  18.2 18.2 -12.8 8.2 99.9 94.5 -183.9
 GLY-64   TYR-65  14.4 14.6 -27.1 -4.2 45.8 37.2 560.0
 TYR-65   LEU-66  12.9 12.9 -2.2 10.4 77.9 79.1 -117.2
 LEU-66   THR-67  9.7 9.8 -1.3 1.6 77.7 78.0 -10.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-169   ALA-170  6.3 6.5 -0.8 0.3 58.2 58.5 37.8
 ALA-170   THR-171  6.5 6.6 2.1 4.0 72.4 73.8 120.5
 THR-171   GLU-172  7.7 7.9 0.6 -14.2 146.3 146.1 221.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-178   SER-179  14.6 14.6 4.3 8.5 89.9 87.3 -91.4
 SER-179   SER-180  11.8 11.8 -8.2 4.3 49.2 52.9 96.7
 SER-180   ASN-181  8.4 8.4 1.9 -1.8 89.2 88.2 58.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees