Sucrose Isomerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-54   TYR-55  1.9 2.5 1.1 5.8 51.3 48.5 23.7
 TYR-55   ALA-56  3.7 3.7 3.8 0.3 38.4 38.1 49.6
 ALA-56   SER-57  5.6 5.6 0.9 3.1 108.4 109.2 -23.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-70   GLU-71  8.6 8.2 0.7 3.1 140.4 139.1 -46.2
 GLU-71   VAL-72  5.8 5.4 -2.7 11.4 112.0 112.0 26.8
 VAL-72   MET-73  2.1 1.6 -5.4 -1.4 63.5 59.6 95.7
 MET-73   LYS-74  2.8 3.1 18.3 -8.1 145.1 144.8 -80.7
 LYS-74   GLU-75  2.7 3.2 -2.5 7.0 89.6 92.7 -36.1
 GLU-75   TYR-76  6.0 6.4 -8.0 7.6 118.0 119.8 63.9
 TYR-76   GLY-77  5.3 5.5 -10.3 2.6 63.4 64.1 5.6
 GLY-77   THR-78  4.5 4.7 4.7 -4.7 96.2 92.1 -18.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-96   MET-97  7.3 7.2 -4.0 5.7 62.2 59.8 12.7
 MET-97   VAL-98  3.8 3.6 -14.0 21.9 135.9 138.6 46.9
 VAL-98   ASP-99  0.9 0.9 3.1 -14.4 116.7 114.9 93.6
 ASP-99   VAL-100  2.9 2.9 -10.6 4.0 107.5 109.4 -84.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-190   ASP-191  10.6 10.4 6.2 3.4 112.9 109.9 -50.2
 ASP-191   LYS-192  13.7 13.6 -3.7 -2.8 50.9 60.1 60.9
 LYS-192   GLY-193  11.8 11.7 4.0 -18.0 53.8 47.8 -116.1
 GLY-193   VAL-194  11.8 11.8 16.6 -0.6 59.8 68.4 -5.0
 VAL-194   SER-195  8.2 8.1 1.8 40.8 15.7 3.9 500.4
 SER-195   GLY-196  8.4 8.1 -33.6 -10.4 127.8 126.2 -335.9
 GLY-196   MET-197  4.8 4.6 13.3 2.3 118.8 121.8 -71.3
 MET-197   ARG-198  3.3 2.9 -0.5 2.4 126.7 124.3 13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-275   MET-276  4.3 4.1 -4.3 12.8 108.7 107.8 23.2
 MET-276   ALA-277  1.1 1.3 -14.6 2.4 68.4 73.2 -12.1
 ALA-277   PHE-278  4.2 4.8 -11.5 17.7 62.3 68.8 27.7
 PHE-278   THR-279  6.6 7.2 -4.8 16.2 108.1 113.4 35.8
 THR-279   PHE-280  10.0 10.4 1.6 -7.2 106.2 109.7 20.4
 PHE-280   ASP-281  13.4 13.9 -13.8 12.3 131.2 129.9 -70.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-308   VAL-309  11.8 12.2 -15.7 10.2 129.3 130.2 -5.7
 VAL-309   ASP-310  9.6 10.2 -4.2 8.6 72.3 72.3 -32.9
 ASP-310   ALA-311  7.4 7.9 -12.6 20.6 42.8 49.2 17.8
 ALA-311   ILE-312  7.0 7.4 -8.6 2.3 107.2 114.4 -82.9
 ILE-312   ALA-313  7.2 7.2 5.5 7.5 66.7 66.6 131.8
 ALA-313   GLY-314  3.8 3.7 4.0 1.6 139.6 138.2 -70.1
 GLY-314   GLU-315  2.3 2.6 -2.8 -8.4 91.2 90.8 15.1
 GLU-315   TYR-316  1.6 2.1 2.6 2.8 38.3 31.5 45.2
 TYR-316   GLY-317  4.0 4.3 -1.4 -1.1 158.5 155.2 -8.2
 GLY-317   TRP-318  2.3 2.6 -6.9 1.5 108.8 103.9 -7.3
 TRP-318   ASN-319  0.8 0.6 -2.3 6.0 129.3 127.8 28.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees