Pyruvate Kinase, M2 Isozyme

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-114   LYS-115  6.1 6.4 -1.4 6.5 131.5 131.4 15.8
 LYS-115   GLY-116  6.6 7.0 -4.0 18.2 104.1 106.9 35.9
 GLY-116   PRO-117  3.5 3.7 -30.5 16.6 101.2 92.2 11.9
 PRO-117   GLU-118  5.6 5.1 69.0 -51.9 30.8 27.4 74.6
 GLU-118   ILE-119  7.6 7.9 9.5 -2.7 91.4 93.7 -13.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-219   ALA-220  7.2 7.4 23.5 -3.3 110.2 114.9 -20.5
 ALA-220   VAL-221  4.5 4.7 17.2 -17.4 59.0 84.5 8.2
 VAL-221   SER-222  2.4 2.2 52.0 -19.1 63.3 73.9 84.0
 SER-222   GLU-223  5.1 5.2 -8.5 -6.9 153.3 155.3 -54.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees