Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-455   GLY-456  5.4 5.3 -3.3 9.7 22.1 24.0 -136.8
 GLY-456   THR-457  6.1 6.0 -3.1 2.0 40.5 42.8 103.2
 THR-457   TYR-458  2.8 2.7 -2.6 5.9 107.5 109.0 73.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-476   ASP-477  1.6 1.5 3.3 -1.2 135.8 134.9 -87.7
 ASP-477   VAL-478  4.3 4.2 -2.6 0.6 73.1 72.4 8.3
 VAL-478   PRO-479  6.8 6.7 -5.3 8.1 60.7 61.4 -116.1
 PRO-479   GLY-480  9.6 9.5 -5.7 8.6 78.9 76.6 171.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees